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GenBank Identifier | RefSeq Acc. | Name |
18450238 | NC_003379.1 | Miscanthus streak virus - [91] |
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ID![]() |
strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
12763 | + | 296 | 90 | 20 | -21 | NP_569145 | 5' arm 3' arm | ||
12764 | + | 1495 | 90 | 21.5 | -24.2 | NP_569146 | 5' arm 3' arm | ||
12765 | + | 2359 | 89 | 24 | -35.09 | NP_569143 | 5' arm 3' arm | ||
12766 | + | 2530 | 89 | 26 | -24.7 | NP_569143 | 5' arm 3' arm | ||
12767 | - | 1980 | 77 | 20 | -24.8 | NP_569147 | 5' arm 3' arm | ||
12768 | - | 2446 | 87 | 20 | -37.1 | NP_569143 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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