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GenBank Identifier | RefSeq Acc. | Name |
50428566 | NC_006064.1 | Humulus japonicus latent virus RNA 1 |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
28667 | - | 1780 | 87 | 19 | -23.2 | YP_054422 | 5' arm 3' arm | ||
28668 | - | 1135 | 85 | 25.5 | -21.6 | YP_054423 | 5' arm 3' arm | ||
28669 | + | 888 | 88 | 22.5 | -19.4 | YP_054424 | 5' arm 3' arm | ||
28670 | - | 1116 | 87 | 19 | -21.6 | YP_054425 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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