miRNA display CGI


Results 1 - 14 of 14 are showing below:
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GenBank Identifier RefSeq Acc. Name
47131155 NC_005872.1 Pyrobaculum spherical virus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
27484 + 1310 87 23.5 -30 5' arm      3' arm
27496 + 26283 85 23 -24 YP_015567 5' arm      3' arm
27495 + 22666 86 23 -20.2 YP_015560 5' arm      3' arm
27493 + 20321 90 23.5 -20.1 5' arm      3' arm
27494 + 20625 90 24 -20 YP_015555 5' arm      3' arm
27492 + 19805 90 24.5 -22.4 YP_015554 5' arm      3' arm
27491 + 15139 90 21.5 -19.6 YP_015543 5' arm      3' arm
27490 + 14042 86 21.5 -20 YP_015542 5' arm      3' arm
27488 + 13596 90 22.5 -20.3 YP_015541 5' arm      3' arm
27487 + 11167 88 22.5 -24.5 YP_015538 5' arm      3' arm
27489 + 13794 90 23 -22.9 YP_015541 5' arm      3' arm
27486 + 8049 90 20.5 -23.7 YP_015532 5' arm      3' arm
27485 + 6736 86 29.5 -31.3 YP_015530 5' arm      3' arm
27497 - 309 89 20.5 -20.9 YP_015522 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.