miRNA display CGI


Results 1 - 20 of 23 are showing below:
Show page:


GenBank Identifier RefSeq Acc. Name
48697070 NC_005884.1 Pseudomonas aeruginosa bacteriophage PaP2 virion

<< Previous Page | Next Page >>
ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
27728 - 391 88 20.5 -23.9 5' arm      3' arm
27730 - 1164 82 28 -27.4 5' arm      3' arm
27732 - 7245 82 19 -24.5 5' arm      3' arm
27734 - 8640 88 21.5 -26.3 YP_024740 5' arm      3' arm
27733 - 8534 86 23.5 -23.9 YP_024740 5' arm      3' arm
27735 - 29842 90 22 -32 5' arm      3' arm
27736 - 31672 86 22.5 -21.1 YP_024764 5' arm      3' arm
27737 - 36722 88 19 -20.6 YP_024774 5' arm      3' arm
27731 - 1971 82 27.5 -19.4 5' arm      3' arm
27729 - 558 87 19 -20.5 YP_024729 5' arm      3' arm
27724 + 35970 90 21.5 -25.31 YP_024772 5' arm      3' arm
27718 + 10686 90 23 -26.5 YP_024743 5' arm      3' arm
27719 + 11816 90 22.5 -29.4 5' arm      3' arm
27717 + 9680 89 19 -19.7 5' arm      3' arm
27721 + 24028 86 23.5 -24.8 5' arm      3' arm
27720 + 23586 90 22 -21 YP_024753 5' arm      3' arm
27722 + 29753 90 26 -29.2 5' arm      3' arm
27727 + 42653 89 21.5 -25 YP_024784 5' arm      3' arm
27725 + 41056 79 23.5 -28.7 YP_024782 5' arm      3' arm
27723 + 31791 90 20 -20 YP_024764 5' arm      3' arm
<< Previous Page | Next Page >>

* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

Download Candidate Sequences

Back To miRNA display CGI home



TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.