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GenBank Identifier | RefSeq Acc. | Name |
54193767 | NC_006367.1 | Magnaporthe grisea virus 1 |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
30306 | + | 687 | 90 | 22.5 | -19.5 | YP_122351 | 5' arm 3' arm | ||
30307 | + | 1185 | 90 | 21 | -24.2 | YP_122351 | 5' arm 3' arm | ||
30308 | + | 1414 | 89 | 26.5 | -28.1 | YP_122351 | 5' arm 3' arm | ||
30309 | + | 1866 | 88 | 20.5 | -27.4 | YP_122351 | 5' arm 3' arm | ||
30310 | + | 2103 | 85 | 19 | -32.9 | YP_122351 | 5' arm 3' arm | ||
30311 | + | 2228 | 90 | 20 | -26.2 | YP_122351 | 5' arm 3' arm | ||
30312 | + | 2384 | 85 | 19.5 | -25.2 | YP_122351 | 5' arm 3' arm | ||
30313 | + | 2605 | 89 | 21.5 | -25.1 | YP_122351 | 5' arm 3' arm | ||
30314 | + | 2805 | 84 | 22.5 | -25.9 | YP_122352 | 5' arm 3' arm | ||
30315 | + | 3667 | 82 | 22.5 | -24.2 | YP_122352 | 5' arm 3' arm | ||
30316 | - | 1502 | 89 | 20.5 | -23.4 | YP_122351 | 5' arm 3' arm | ||
30317 | - | 2149 | 90 | 19 | -24.7 | YP_122351 | 5' arm 3' arm | ||
30318 | - | 2891 | 88 | 20 | -20.1 | YP_122352 | 5' arm 3' arm | ||
30319 | - | 3672 | 87 | 22.5 | -25.4 | YP_122352 | 5' arm 3' arm | ||
30320 | - | 4212 | 87 | 19 | -23.1 | YP_122352 | 5' arm 3' arm | ||
30321 | - | 4316 | 88 | 20.5 | -21.8 | YP_122352 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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