miRNA display CGI


Results 21 - 40 of 186 are showing below:
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GenBank Identifier RefSeq Acc. Name
48697190 NC_005887.1 Burkholderia cepacia complex phage BcepC6B

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
28102 + 42166 87 23 -27.1 YP_024966 5' arm      3' arm
28128 - 12473 90 23 -21.6 YP_024935 5' arm      3' arm
28166 - 30153 88 23 -24.4 YP_024952 5' arm      3' arm
28036 + 21032 90 23 -23.3 YP_024939 5' arm      3' arm
28077 + 33859 89 23 -25.9 YP_024957 5' arm      3' arm
28106 - 3078 90 23 -28.1 YP_024924 5' arm      3' arm
28132 - 13690 87 23 -33.4 YP_024935 5' arm      3' arm
28130 - 13021 90 23 -20.9 YP_024935 5' arm      3' arm
28098 + 41000 89 23 -23.3 YP_024966 5' arm      3' arm
28160 - 27389 90 23 -26.6 YP_024948 5' arm      3' arm
28096 + 40115 90 23 -23.7 YP_024966 5' arm      3' arm
28178 - 40544 90 22.5 -26.2 YP_024966 5' arm      3' arm
28177 - 38895 89 22.5 -19.6 YP_024964 5' arm      3' arm
28070 + 31303 89 22.5 -24.8 YP_024952 5' arm      3' arm
28129 - 12883 90 22.5 -30 YP_024935 5' arm      3' arm
28136 - 15410 89 22.5 -21 YP_024936 5' arm      3' arm
28015 + 9761 86 22.5 -29.7 YP_024932 5' arm      3' arm
28146 - 19069 90 22.5 -27.4 5' arm      3' arm
28087 + 36308 90 22.5 -28.1 YP_024959 5' arm      3' arm
28119 - 7401 89 22.5 -28.3 YP_024929 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.