miRNA display CGI


Results 41 - 60 of 186 are showing below:
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GenBank Identifier RefSeq Acc. Name
48697190 NC_005887.1 Burkholderia cepacia complex phage BcepC6B

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
27999 + 1824 88 20 -24.8 YP_024923 5' arm      3' arm
28118 - 6946 89 20 -26.1 YP_024928 5' arm      3' arm
28088 + 36570 88 20 -23.9 YP_024960 5' arm      3' arm
28144 - 18485 87 20 -21.4 YP_024937 5' arm      3' arm
28134 - 14363 89 20 -24.4 YP_024936 5' arm      3' arm
28089 + 37614 89 20 -20.9 5' arm      3' arm
28168 - 31338 90 20 -24.9 YP_024952 5' arm      3' arm
28024 + 14329 87 20 -25.6 YP_024936 5' arm      3' arm
28025 + 15233 77 20 -25.5 YP_024936 5' arm      3' arm
28172 - 33271 90 20 -24.1 5' arm      3' arm
28013 + 9090 89 20 -22.3 YP_024932 5' arm      3' arm
28095 + 39977 89 20 -20.4 YP_024966 5' arm      3' arm
28059 + 28901 90 20 -19.4 YP_024951 5' arm      3' arm
28075 + 32639 84 20 -22.8 YP_024954 5' arm      3' arm
28003 + 2550 90 20 -24.6 YP_024923 5' arm      3' arm
28170 - 31718 88 20.5 -23.3 YP_024953 5' arm      3' arm
28053 + 27562 89 20.5 -29 YP_024949 5' arm      3' arm
28021 + 13977 90 20.5 -25.6 YP_024935 5' arm      3' arm
28029 + 17546 88 20.5 -23.9 YP_024937 5' arm      3' arm
28169 - 31427 88 20.5 -20.8 YP_024952 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.