miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
28004	+	3464	81	20.5	-19.5	YP_024925		5' arm      3' arm
27996	+	225	88	21	-20.2	YP_024921		5' arm      3' arm
28006	+	4431	89	21.5	-25.5	YP_024925		5' arm      3' arm
28001	+	2070	88	21.5	-22.9	YP_024923		5' arm      3' arm
28005	+	3951	85	22	-23.8	YP_024925		5' arm      3' arm
28012	+	8708	88	21.5	-24.6	YP_024932		5' arm      3' arm
28009	+	7299	88	21	-20.6	YP_024929		5' arm      3' arm
28028	+	17001	84	21	-26.7	YP_024937		5' arm      3' arm
28027	+	16288	89	21.5	-21.9	YP_024936		5' arm      3' arm
28023	+	14235	90	21.5	-22.8	YP_024936		5' arm      3' arm
28030	+	17778	89	24.5	-22	YP_024937		5' arm      3' arm
28020	+	13833	90	19	-23.7	YP_024935		5' arm      3' arm
28018	+	12325	85	19	-34.6	YP_024935		5' arm      3' arm
28016	+	10040	86	20.5	-19.8	YP_024932		5' arm      3' arm
28019	+	13562	90	21	-20.3	YP_024935		5' arm      3' arm
28014	+	9602	90	21	-23.8	YP_024932		5' arm      3' arm
28015	+	9761	86	22.5	-29.7	YP_024932		5' arm      3' arm
28017	+	10946	90	24.5	-25.3	YP_024933		5' arm      3' arm
28010	+	7954	90	19	-20.5	YP_024931		5' arm      3' arm
28013	+	9090	89	20	-22.3	YP_024932		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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