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GenBank Identifier | RefSeq Acc. | Name |
48697258 | NC_005893.1 | Bacteriophage phi AT3 virion |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
28227 | + | 21711 | 87 | 19 | -33.9 | 5' arm 3' arm | |||
28228 | + | 22399 | 84 | 19.5 | -21.2 | 5' arm 3' arm | |||
28229 | + | 26217 | 88 | 23 | -20.8 | YP_025050 | 5' arm 3' arm | ||
28230 | + | 36853 | 86 | 21 | -21.7 | YP_025075 | 5' arm 3' arm | ||
28231 | - | 5351 | 86 | 21.5 | -21.6 | YP_025031 | 5' arm 3' arm | ||
28232 | - | 15501 | 90 | 19.5 | -25.5 | 5' arm 3' arm | |||
28233 | - | 31088 | 89 | 19.5 | -19.8 | YP_025058 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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