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| GenBank Identifier | RefSeq Acc. | Name |
| 62327168 | NC_006938.1 | Bacteriophage phi JL001 |
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| ID | strand | start position | length | sRNA loop score |
core MFE.
|
NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 31780 | + | 62336 | 83 | 21 | -19.4 | YP_224012 | 5' arm 3' arm | ||
| 31738 | + | 23037 | 90 | 19.5 | -19.4 | YP_223957 | 5' arm 3' arm | ||
| 31757 | + | 37143 | 90 | 19 | -19.4 | YP_223989 | 5' arm 3' arm | ||
| 31902 | - | 57342 | 88 | 20.5 | -19.4 | YP_224010 | 5' arm 3' arm | ||
| 31811 | - | 14387 | 89 | 21.5 | -19.5 | YP_223946 | 5' arm 3' arm | ||
| 31770 | + | 51983 | 87 | 19 | -19.5 | YP_224006 | 5' arm 3' arm | ||
| 31855 | - | 32837 | 88 | 22 | -19.6 | YP_223983 | 5' arm 3' arm | ||
| 31779 | + | 61649 | 90 | 21.5 | -19.7 | YP_224012 | 5' arm 3' arm | ||
| 31799 | - | 8646 | 89 | 21.5 | -19.7 | YP_223937 | 5' arm 3' arm | ||
| 31726 | + | 10825 | 87 | 19.5 | -19.7 | YP_223939 | 5' arm 3' arm | ||
| 31891 | - | 51661 | 90 | 21.5 | -19.8 | YP_224006 | 5' arm 3' arm | ||
| 31751 | + | 32216 | 90 | 19.5 | -19.9 | YP_223983 | 5' arm 3' arm | ||
| 31880 | - | 43650 | 87 | 21 | -19.99 | YP_223996 | 5' arm 3' arm | ||
| 31722 | + | 9348 | 88 | 19 | -20 | YP_223938 | 5' arm 3' arm | ||
| 31750 | + | 31827 | 87 | 19 | -20 | YP_223982 | 5' arm 3' arm | ||
| 31839 | - | 27395 | 90 | 19.5 | -20 | YP_223969 | 5' arm 3' arm | ||
| 31830 | - | 24288 | 90 | 21.5 | -20.1 | YP_223960 | 5' arm 3' arm | ||
| 31755 | + | 35691 | 87 | 19 | -20.1 | YP_223986 | 5' arm 3' arm | ||
| 31827 | - | 22508 | 89 | 21 | -20.1 | YP_223957 | 5' arm 3' arm | ||
| 31847 | - | 30247 | 86 | 19.5 | -20.2 | YP_223979 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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