miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
27978	-	25028	89	20	-23.4			5' arm      3' arm
27940	+	27711	87	19	-25.1			5' arm      3' arm
27943	+	33715	90	19	-24			5' arm      3' arm
27985	-	34588	89	20.5	-26.4			5' arm      3' arm
27962	-	11705	87	23.5	-35.4	YP_024863		5' arm      3' arm
27963	-	11827	89	20	-22.8	YP_024864		5' arm      3' arm
27923	+	11739	89	21.5	-25.2	YP_024864		5' arm      3' arm
27965	-	13407	88	22.5	-26.4	YP_024865		5' arm      3' arm
27966	-	13571	85	22	-20.6	YP_024865		5' arm      3' arm
27964	-	12908	81	20.5	-20.7	YP_024865		5' arm      3' arm
27925	+	13606	90	23	-23.6	YP_024865		5' arm      3' arm
27924	+	13114	89	22	-26.1	YP_024865		5' arm      3' arm
27967	-	14643	90	19.5	-25	YP_024867		5' arm      3' arm
27926	+	14893	85	22	-21.3	YP_024868		5' arm      3' arm
27968	-	14977	90	21	-21.1	YP_024868		5' arm      3' arm
27927	+	15040	90	23	-26	YP_024868		5' arm      3' arm
27969	-	15362	87	27.5	-26.6	YP_024869		5' arm      3' arm
27928	+	16218	90	23.5	-21.7	YP_024871		5' arm      3' arm
27929	+	16699	90	20	-25.9	YP_024871		5' arm      3' arm
27971	-	17010	89	19	-24.6	YP_024871		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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