miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
27940	+	27711	87	19	-25.1			5' arm      3' arm
27941	+	29535	90	22.5	-20.1	YP_024888		5' arm      3' arm
27942	+	29703	90	20.5	-19.5	YP_024888		5' arm      3' arm
27943	+	33715	90	19	-24			5' arm      3' arm
27944	+	33975	84	22	-29.6	YP_291186		5' arm      3' arm
27945	+	35483	89	19	-23	YP_024893		5' arm      3' arm
27946	+	38600	90	21.5	-23.32	YP_024897		5' arm      3' arm
27947	+	41268	82	20.5	-21.7	YP_024900		5' arm      3' arm
27948	+	41504	77	19	-23.8	YP_024900		5' arm      3' arm
27949	+	42018	88	21	-25.8	YP_024900		5' arm      3' arm
27950	+	42732	84	24	-29.6	YP_024901		5' arm      3' arm
27951	+	43519	86	24	-22.9	YP_024902		5' arm      3' arm
27952	+	43800	89	20	-21	YP_024902		5' arm      3' arm
27953	+	43942	87	20.5	-28.4	YP_024902		5' arm      3' arm
27954	+	44069	87	22.5	-21.6	YP_024902		5' arm      3' arm
27955	+	44960	87	20	-22.9	YP_024903		5' arm      3' arm
27956	-	1537	89	19	-23.4	YP_024910		5' arm      3' arm
27957	-	3688	88	21.5	-27.3	YP_024912		5' arm      3' arm
27958	-	5364	87	24.5	-23.6	YP_024914		5' arm      3' arm
27959	-	6086	87	22.5	-20.7	YP_024914		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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