miRNA display CGI


Results 1 - 20 of 259 are showing below:
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GenBank Identifier RefSeq Acc. Name
56692908 NC_006552.1 Pseudomonas aeruginosa phage F116

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
30728 + 15051 90 23 -19.4 5' arm      3' arm
30733 + 16814 90 23 -19.4 5' arm      3' arm
30830 - 12600 89 19.5 -19.4 YP_164281 5' arm      3' arm
30896 - 44944 90 21 -19.5 YP_164321 5' arm      3' arm
30705 + 6736 87 23.5 -19.5 YP_164274 5' arm      3' arm
30909 - 49769 87 21 -19.5 YP_164323 5' arm      3' arm
30891 - 42777 90 23.5 -19.54 YP_164319 5' arm      3' arm
30865 - 31099 86 19.5 -19.6 YP_164307 5' arm      3' arm
30892 - 43837 86 21 -19.6 YP_164320 5' arm      3' arm
30787 + 45979 90 20 -19.6 YP_164322 5' arm      3' arm
30915 - 52605 89 22.5 -19.6 YP_164323 5' arm      3' arm
30747 + 23668 90 20.5 -19.6 YP_164303 5' arm      3' arm
30912 - 50792 90 20 -19.7 YP_164323 5' arm      3' arm
30866 - 31217 89 22 -19.7 YP_164307 5' arm      3' arm
30832 - 15955 90 19 -19.8 YP_164287 5' arm      3' arm
30851 - 26191 87 19.5 -19.8 YP_164304 5' arm      3' arm
30812 + 62562 90 20 -19.8 YP_164331 5' arm      3' arm
30727 + 14957 88 20.5 -19.8 YP_164284 5' arm      3' arm
30936 - 61278 86 19.5 -19.9 YP_164329 5' arm      3' arm
30697 + 4464 86 22.5 -19.9 YP_164272 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.