miRNA display CGI


Results 61 - 80 of 259 are showing below:
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GenBank Identifier RefSeq Acc. Name
56692908 NC_006552.1 Pseudomonas aeruginosa phage F116

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
30711 + 7963 89 23 -21.4 YP_164275 5' arm      3' arm
30713 + 8725 90 19 -24.4 YP_164276 5' arm      3' arm
30715 + 9386 90 19 -26.8 YP_164277 5' arm      3' arm
30714 + 9294 90 22 -23.9 YP_164277 5' arm      3' arm
30716 + 10335 86 25 -33.3 YP_164278 5' arm      3' arm
30828 - 10864 87 19.5 -27.6 YP_164278 5' arm      3' arm
30717 + 10796 89 19.5 -24.9 YP_164278 5' arm      3' arm
30719 + 11279 83 19 -22 YP_164279 5' arm      3' arm
30718 + 11188 90 20 -23.8 YP_164279 5' arm      3' arm
30721 + 11755 85 20.5 -22.5 YP_164280 5' arm      3' arm
30720 + 11582 89 20.5 -20.6 YP_164280 5' arm      3' arm
30829 - 11611 89 21.5 -27.6 YP_164280 5' arm      3' arm
30830 - 12600 89 19.5 -19.4 YP_164281 5' arm      3' arm
30724 + 13022 84 22.5 -23.8 YP_164282 5' arm      3' arm
30723 + 12878 89 25.5 -33.4 YP_164282 5' arm      3' arm
30726 + 14319 90 21.5 -22.8 YP_164283 5' arm      3' arm
30725 + 14011 90 22.5 -22.9 YP_164283 5' arm      3' arm
30831 - 14492 89 22.5 -26.8 YP_164283 5' arm      3' arm
30727 + 14957 88 20.5 -19.8 YP_164284 5' arm      3' arm
30729 + 15492 88 19 -26.1 YP_164286 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.