miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
235	+	23799	90	20	-23	AP_000213		5' arm      3' arm
236	+	25848	90	22	-37.3	AP_000214		5' arm      3' arm
237	+	33940	78	20	-22.3	AP_000227		5' arm      3' arm
238	+	34876	75	20	-27.8	AP_000231		5' arm      3' arm
239	-	2186	89	21.5	-29.2	AP_000198		5' arm      3' arm
240	-	5217	89	20	-25.1	AP_000201		5' arm      3' arm
241	-	5856	88	20	-20.4	AP_000202		5' arm      3' arm
242	-	6428	86	20	-22.8	AP_000202		5' arm      3' arm
243	-	8432	87	19	-26.02	AP_000202		5' arm      3' arm
244	-	9105	86	20.5	-25.6	AP_000203		5' arm      3' arm
245	-	9630	89	19	-20.2	AP_000203		5' arm      3' arm
246	-	10728	87	23	-36.1			5' arm      3' arm
247	-	11163	90	23	-28.9	AP_000204		5' arm      3' arm
248	-	11556	88	19.5	-24.6	AP_000204		5' arm      3' arm
249	-	12470	90	20.5	-23.6	AP_000205		5' arm      3' arm
250	-	12666	89	23	-29.7	AP_000205		5' arm      3' arm
251	-	13118	90	20.5	-27.2	AP_000205		5' arm      3' arm
252	-	13655	89	19	-25.1	AP_000205		5' arm      3' arm
253	-	13950	90	21	-24.9	AP_000205		5' arm      3' arm
254	-	15301	89	20	-26	AP_000206		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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