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GenBank Identifier | RefSeq Acc. | Name |
20806004 | NC_003849.1 | Plantago asiatica mosaic virus |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
15290 | - | 820 | 90 | 21.5 | -33.2 | NP_620836 | 5' arm 3' arm | ||
15291 | - | 1481 | 90 | 23 | -23 | NP_620836 | 5' arm 3' arm | ||
15292 | - | 1994 | 90 | 23 | -21 | NP_620836 | 5' arm 3' arm | ||
15293 | - | 3482 | 89 | 21.5 | -25.3 | NP_620836 | 5' arm 3' arm | ||
15294 | - | 3976 | 90 | 20 | -20.3 | NP_620836 | 5' arm 3' arm | ||
15295 | - | 5121 | 89 | 23 | -24 | NP_620839 | 5' arm 3' arm | ||
15296 | - | 5823 | 89 | 25.5 | -24.5 | NP_620840 | 5' arm 3' arm | ||
15297 | - | 5932 | 90 | 23.5 | -21 | NP_620840 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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