miRNA display CGI


Results 1 - 20 of 208 are showing below:
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GenBank Identifier RefSeq Acc. Name
9630386 NC_001900.1 Mycobacteriophage D29

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
7294 - 12582 90 23 -19.4 NP_046832 5' arm      3' arm
7290 - 11965 90 19 -19.4 NP_046831 5' arm      3' arm
7280 - 8109 90 23 -19.5 NP_046828 5' arm      3' arm
7224 + 37453 89 19 -19.5 NP_046870 5' arm      3' arm
7334 - 30095 88 20 -19.5 NP_046860 5' arm      3' arm
7197 + 23678 87 21 -19.6 NP_046847 5' arm      3' arm
7353 - 39730 90 24 -19.7 NP_046876 5' arm      3' arm
7304 - 16434 88 21.5 -19.9 NP_046841 5' arm      3' arm
7338 - 32559 87 22 -19.9 NP_046863 5' arm      3' arm
7291 - 12076 89 21.5 -19.9 NP_046831 5' arm      3' arm
7365 - 44208 88 19.5 -20 NP_046887 5' arm      3' arm
7343 - 35115 89 19.5 -20.1 NP_046865 5' arm      3' arm
7235 + 42296 90 24.5 -20.1 NP_046882 5' arm      3' arm
7163 + 3356 90 19.5 -20.1 NP_046824 5' arm      3' arm
7325 - 25967 87 19.5 -20.2 NP_046850 5' arm      3' arm
7328 - 28677 88 19 -20.3 NP_046856 5' arm      3' arm
7260 - 2026 90 24 -20.3 NP_046820 5' arm      3' arm
7173 + 9783 87 20.5 -20.4 NP_046829 5' arm      3' arm
7184 + 17504 90 23 -20.4 NP_046842 5' arm      3' arm
7277 - 7170 89 21 -20.4 NP_046827 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.