miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
18640237 NC_003391.1 Camelpox virus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
13083 + 8891 89 19 -23.4 NP_570395 5' arm      3' arm
13084 + 175532 90 22 -23.8 NP_570578 5' arm      3' arm
13087 - 56979 88 24 -24.5 NP_570451 5' arm      3' arm
13085 - 8189 88 20.5 -22 NP_570394 5' arm      3' arm
13086 - 9949 90 19 -23 NP_570396 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.