miRNA display CGI


Results 1 - 6 of 6 are showing below:
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GenBank Identifier RefSeq Acc. Name
20564172 NC_003823.1 Ustilago maydis virus H1

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
15235 + 3695 89 25.5 -21 NP_620728 5' arm      3' arm
15234 + 3429 89 19.5 -23.16 NP_620728 5' arm      3' arm
15233 + 199 86 19 -20.5 5' arm      3' arm
15238 - 4559 90 23.5 -25.7 NP_620728 5' arm      3' arm
15236 - 2378 87 20.5 -24.6 NP_620728 5' arm      3' arm
15237 - 3325 89 20 -19.5 NP_620728 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.