miRNA display CGI


Results 1 - 8 of 8 are showing below:
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GenBank Identifier RefSeq Acc. Name
56692993 NC_006554.1 Sapovirus C12

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
30942 + 340 86 19.5 -19.5 YP_164336 5' arm      3' arm
30943 + 950 88 20 -22.4 YP_164336 5' arm      3' arm
30944 + 3630 83 19 -21.1 YP_164336 5' arm      3' arm
30945 + 5928 89 22 -23.3 YP_164336 5' arm      3' arm
30946 + 7041 86 20 -20.6 YP_164338 5' arm      3' arm
30947 - 5004 87 20 -23.4 YP_164336 5' arm      3' arm
30948 - 5097 88 24 -23.8 YP_164336 5' arm      3' arm
30949 - 6115 88 21.5 -23.9 YP_164336 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.