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GenBank Identifier | RefSeq Acc. | Name |
56698748 | NC_006563.1 | Trichechus manatus latirostris papillomavirus type 1 |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
31275 | - | 5307 | 88 | 20 | -20.8 | YP_164626 | 5' arm 3' arm | ||
31274 | - | 3384 | 89 | 20 | -20.7 | YP_164624 | 5' arm 3' arm | ||
31273 | - | 3263 | 90 | 22.5 | -33 | YP_164624 | 5' arm 3' arm | ||
31272 | - | 1059 | 90 | 23 | -20.92 | YP_164623 | 5' arm 3' arm | ||
31271 | + | 4770 | 89 | 22.5 | -33.6 | YP_164626 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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