miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
62362146 NC_006951.1 Erethizon dorsatum papillomavirus type 1

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
32029 + 3937 88 21 -20.2 YP_224226 5' arm      3' arm
32028 + 3540 85 19.5 -20.8 YP_224224 5' arm      3' arm
32030 + 6770 88 20 -22.4 YP_224227 5' arm      3' arm
32032 - 2397 86 22 -22 YP_224223 5' arm      3' arm
32031 - 90 89 19 -22 YP_224221 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.