miRNA display CGI


Results 1 - 20 of 78 are showing below:
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GenBank Identifier RefSeq Acc. Name
22788711 NC_004156.1 Heliothis zea virus 1

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
16649 + 122878 85 29.5 -27.3 NP_690502 5' arm      3' arm
16671 - 72925 81 29 -21.6 NP_690471 5' arm      3' arm
16669 - 58885 87 26.5 -30.7 NP_690462 5' arm      3' arm
16666 - 53470 90 26 -27.4 NP_690456 5' arm      3' arm
16699 - 207372 86 25.5 -28.7 NP_690559 5' arm      3' arm
16684 - 135420 90 25.5 -25.8 NP_690514 5' arm      3' arm
16654 + 175542 84 25.5 -22.5 NP_690538 5' arm      3' arm
16660 + 222971 88 25.5 -28.94 NP_690573 5' arm      3' arm
16687 - 144766 90 25 -26.1 5' arm      3' arm
16680 - 114050 89 25 -24.7 NP_690495 5' arm      3' arm
16698 - 205724 89 25 -23.4 NP_690559 5' arm      3' arm
16631 + 39652 90 25 -21.1 NP_690450 5' arm      3' arm
16648 + 112029 90 24.5 -21.7 NP_690494 5' arm      3' arm
16688 - 145534 89 24.5 -21.4 NP_690518 5' arm      3' arm
16677 - 109209 87 24.5 -21.9 NP_690493 5' arm      3' arm
16691 - 166060 90 24 -21 NP_690531 5' arm      3' arm
16645 + 103109 90 24 -21 NP_690489 5' arm      3' arm
16637 + 67380 90 24 -22.4 NP_690469 5' arm      3' arm
16690 - 164005 90 24 -31.5 NP_690528 5' arm      3' arm
16673 - 80567 90 24 -19.4 NP_690477 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.