miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
16653	+	170034	90	21	-30	NP_690534		5' arm      3' arm
16674	-	84631	90	21	-20.3	NP_690479		5' arm      3' arm
16693	-	174466	89	21	-28	NP_690538		5' arm      3' arm
16670	-	63859	89	21	-21.6	NP_690466		5' arm      3' arm
16668	-	57896	88	21	-27.6	NP_690460		5' arm      3' arm
16647	+	109996	86	21	-24	NP_690494		5' arm      3' arm
16633	+	56814	82	21	-25.4			5' arm      3' arm
16640	+	81086	89	21	-20	NP_690477		5' arm      3' arm
16643	+	99501	90	21	-24.5	NP_690488		5' arm      3' arm
16644	+	101712	89	21	-20.2	NP_690489		5' arm      3' arm
16675	-	90349	90	21	-20.53	NP_690481		5' arm      3' arm
16686	-	144350	89	21.5	-26.9			5' arm      3' arm
16628	+	35467	78	21.5	-22.5	NP_690447		5' arm      3' arm
16700	-	211467	89	21.5	-25.5	NP_690563		5' arm      3' arm
16632	+	40560	89	21.5	-20.1	NP_690450		5' arm      3' arm
16635	+	57809	88	21.5	-23.4	NP_690460		5' arm      3' arm
16676	-	96293	89	21.5	-22	NP_690486		5' arm      3' arm
16636	+	62672	86	21.5	-21.46	NP_690465		5' arm      3' arm
16685	-	140108	89	21.5	-23.3	NP_690516		5' arm      3' arm
16703	-	227138	90	21.5	-22.3	NP_690573		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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