miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
16627	+	11143	87	19.5	-19.4	NP_690423		5' arm      3' arm
16628	+	35467	78	21.5	-22.5	NP_690447		5' arm      3' arm
16631	+	39652	90	25	-21.1	NP_690450		5' arm      3' arm
16630	+	39526	89	23.5	-22.2	NP_690450		5' arm      3' arm
16629	+	39304	89	22.5	-25.4	NP_690450		5' arm      3' arm
16632	+	40560	89	21.5	-20.1	NP_690450		5' arm      3' arm
16635	+	57809	88	21.5	-23.4	NP_690460		5' arm      3' arm
16633	+	56814	82	21	-25.4			5' arm      3' arm
16641	+	90262	87	23.5	-23.8	NP_690481		5' arm      3' arm
16639	+	78886	90	19.5	-22.1	NP_690476		5' arm      3' arm
16640	+	81086	89	21	-20	NP_690477		5' arm      3' arm
16638	+	75421	85	20.5	-22.5	NP_690473		5' arm      3' arm
16637	+	67380	90	24	-22.4	NP_690469		5' arm      3' arm
16636	+	62672	86	21.5	-21.46	NP_690465		5' arm      3' arm
16634	+	57664	84	19	-21.4	NP_690460		5' arm      3' arm
16661	-	9152	89	23	-20.6	NP_690423		5' arm      3' arm
16702	-	214185	80	19	-23.3	NP_690564		5' arm      3' arm
16700	-	211467	89	21.5	-25.5	NP_690563		5' arm      3' arm
16701	-	213982	89	19.5	-22.7	NP_690564		5' arm      3' arm
16699	-	207372	86	25.5	-28.7	NP_690559		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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