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GenBank Identifier | RefSeq Acc. | Name |
9634055 | NC_001317.1 | Enterobacteria phage 186 |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
1279 | - | 3907 | 89 | 19.5 | -30 | 5' arm 3' arm | |||
1263 | + | 14609 | 89 | 22 | -28.9 | NP_052269 | 5' arm 3' arm | ||
1252 | + | 342 | 86 | 20.5 | -26.7 | NP_052249 | 5' arm 3' arm | ||
1272 | + | 27360 | 90 | 20.5 | -26 | NP_052289 | 5' arm 3' arm | ||
1273 | + | 28755 | 89 | 20.5 | -25.9 | NP_052289 | 5' arm 3' arm | ||
1265 | + | 15567 | 89 | 22.5 | -25.8 | NP_052270 | 5' arm 3' arm | ||
1291 | - | 16389 | 87 | 20 | -25.6 | NP_052272 | 5' arm 3' arm | ||
1269 | + | 18953 | 89 | 19.5 | -25.5 | NP_052274 | 5' arm 3' arm | ||
1259 | + | 6258 | 85 | 19 | -25.3 | NP_052254 | 5' arm 3' arm | ||
1292 | - | 16767 | 90 | 19.5 | -24.6 | NP_052273 | 5' arm 3' arm | ||
1258 | + | 3540 | 85 | 19 | -24.5 | NP_052251 | 5' arm 3' arm | ||
1286 | - | 8481 | 87 | 19 | -24.3 | NP_052259 | 5' arm 3' arm | ||
1285 | - | 7955 | 90 | 22.5 | -24.2 | NP_052258 | 5' arm 3' arm | ||
1271 | + | 27096 | 89 | 23.5 | -24.2 | NP_052289 | 5' arm 3' arm | ||
1295 | - | 18875 | 89 | 19.5 | -24.2 | NP_052273 | 5' arm 3' arm | ||
1293 | - | 17833 | 90 | 19.5 | -24.12 | NP_052273 | 5' arm 3' arm | ||
1275 | - | 1148 | 90 | 21 | -24.1 | NP_052249 | 5' arm 3' arm | ||
1256 | + | 1764 | 90 | 19.5 | -23.9 | NP_052250 | 5' arm 3' arm | ||
1281 | - | 5107 | 87 | 20 | -23.6 | NP_052253 | 5' arm 3' arm | ||
1267 | + | 18034 | 89 | 23 | -23.5 | NP_052273 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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