miRNA display CGI


Results 1 - 20 of 47 are showing below:
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GenBank Identifier RefSeq Acc. Name
9634055 NC_001317.1 Enterobacteria phage 186

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
1279 - 3907 89 19.5 -30 5' arm      3' arm
1263 + 14609 89 22 -28.9 NP_052269 5' arm      3' arm
1252 + 342 86 20.5 -26.7 NP_052249 5' arm      3' arm
1272 + 27360 90 20.5 -26 NP_052289 5' arm      3' arm
1273 + 28755 89 20.5 -25.9 NP_052289 5' arm      3' arm
1265 + 15567 89 22.5 -25.8 NP_052270 5' arm      3' arm
1291 - 16389 87 20 -25.6 NP_052272 5' arm      3' arm
1269 + 18953 89 19.5 -25.5 NP_052274 5' arm      3' arm
1259 + 6258 85 19 -25.3 NP_052254 5' arm      3' arm
1292 - 16767 90 19.5 -24.6 NP_052273 5' arm      3' arm
1258 + 3540 85 19 -24.5 NP_052251 5' arm      3' arm
1286 - 8481 87 19 -24.3 NP_052259 5' arm      3' arm
1285 - 7955 90 22.5 -24.2 NP_052258 5' arm      3' arm
1271 + 27096 89 23.5 -24.2 NP_052289 5' arm      3' arm
1295 - 18875 89 19.5 -24.2 NP_052273 5' arm      3' arm
1293 - 17833 90 19.5 -24.12 NP_052273 5' arm      3' arm
1275 - 1148 90 21 -24.1 NP_052249 5' arm      3' arm
1256 + 1764 90 19.5 -23.9 NP_052250 5' arm      3' arm
1281 - 5107 87 20 -23.6 NP_052253 5' arm      3' arm
1267 + 18034 89 23 -23.5 NP_052273 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.