miRNA display CGI


Results 1 - 20 of 20 are showing below:
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GenBank Identifier RefSeq Acc. Name
56692997 NC_006556.1 Thermoproteus tenax spherical virus 1

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
30965 - 13357 88 21.5 -30 YP_164364 5' arm      3' arm
30969 - 17232 88 19.5 -28.3 YP_164372 5' arm      3' arm
30956 + 7735 90 25 -27.9 YP_164354 5' arm      3' arm
30950 + 56 90 22 -24.4 5' arm      3' arm
30962 + 17153 90 21 -24 YP_164372 5' arm      3' arm
30954 + 6780 89 23.5 -24 YP_164352 5' arm      3' arm
30953 + 6674 90 19.5 -23.9 YP_164352 5' arm      3' arm
30959 + 11580 89 21 -23.61 YP_164362 5' arm      3' arm
30968 - 15907 89 20 -23.2 YP_164368 5' arm      3' arm
30952 + 4435 90 22.5 -22.8 YP_164348 5' arm      3' arm
30966 - 13698 88 21.5 -22.8 YP_164365 5' arm      3' arm
30963 + 18212 89 20 -21.9 YP_164374 5' arm      3' arm
30958 + 10654 90 23 -21 YP_164361 5' arm      3' arm
30967 - 14200 88 20 -20.9 5' arm      3' arm
30960 + 13100 90 20.5 -20.8 YP_164364 5' arm      3' arm
30955 + 7280 89 22 -20.8 YP_164353 5' arm      3' arm
30961 + 13697 88 20 -20.6 YP_164365 5' arm      3' arm
30964 - 965 89 20 -20.4 YP_164342 5' arm      3' arm
30957 + 9532 90 22.5 -20.3 YP_164357 5' arm      3' arm
30951 + 3837 89 20.5 -19.6 YP_164346 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.