miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
56693036 NC_006564.1 Canine papillomavirus 2

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
31279 - 7975 89 20.5 -20.7 5' arm      3' arm
31278 - 5396 86 22.5 -22.62 YP_164634 5' arm      3' arm
31277 + 3904 90 20 -32 YP_164631 5' arm      3' arm
31276 + 3441 85 24 -25.4 YP_164632 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.