miRNA display CGI


Results 1 - 20 of 27 are showing below:
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GenBank Identifier RefSeq Acc. Name
62327307 NC_006940.1 Bacteriophage KS7 virion

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
31936 - 2174 89 19 -22.5 YP_224024 5' arm      3' arm
31931 + 37966 86 21 -23.3 YP_308656 5' arm      3' arm
31932 + 38674 89 21 -22.1 YP_308656 5' arm      3' arm
31933 + 38777 89 20 -20.6 YP_308656 5' arm      3' arm
31934 + 40301 83 20 -22 5' arm      3' arm
31943 - 37033 87 20.5 -21.4 YP_308656 5' arm      3' arm
31944 - 38174 88 20 -20.6 YP_308656 5' arm      3' arm
31945 - 38895 83 19 -27.6 YP_308656 5' arm      3' arm
31942 - 36613 90 19 -21.7 YP_308655 5' arm      3' arm
31930 + 36233 88 19 -19.6 YP_308655 5' arm      3' arm
31929 + 35500 90 21 -23.6 5' arm      3' arm
31928 + 33795 86 23.5 -19.4 YP_224073 5' arm      3' arm
31919 + 38 90 20 -23.5 5' arm      3' arm
31921 + 4770 89 20 -20 YP_224029 5' arm      3' arm
31922 + 7667 84 24 -25.2 YP_224033 5' arm      3' arm
31923 + 12080 90 21.5 -23.2 YP_224037 5' arm      3' arm
31924 + 12453 90 21 -32.6 5' arm      3' arm
31925 + 19819 84 21 -22 YP_224056 5' arm      3' arm
31927 + 25917 81 23.5 -21.6 YP_224063 5' arm      3' arm
31926 + 24801 90 19 -27.5 YP_224063 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.