miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
56693045 NC_006559.1 Solenopsis invicta virus 1

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
30986 + 1201 90 20.5 -19.8 YP_164440 5' arm      3' arm
30987 + 6440 90 22 -21.2 YP_164441 5' arm      3' arm
30988 + 7296 90 21 -23.4 YP_164441 5' arm      3' arm
30989 + 7686 85 20.5 -24.8 YP_164441 5' arm      3' arm
30990 - 5980 79 19 -22.1 YP_164441 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.