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GenBank Identifier | RefSeq Acc. | Name |
56694869 | NC_006557.1 | Bacillus clarkii bacteriophage BCJA1c |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
30970 | + | 12561 | 89 | 23 | -19.8 | YP_164399 | 5' arm 3' arm | ||
30971 | + | 17688 | 89 | 22.5 | -29.5 | 5' arm 3' arm | |||
30972 | + | 20226 | 90 | 22 | -20.6 | YP_164412 | 5' arm 3' arm | ||
30973 | + | 22664 | 76 | 19 | -21.7 | YP_164415 | 5' arm 3' arm | ||
30974 | - | 15211 | 88 | 21.5 | -25 | 5' arm 3' arm | |||
30975 | - | 30121 | 88 | 23 | -24.6 | YP_164427 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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