miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
56693048 NC_006565.1 Lactobacillus plantarum bacteriophage LP65 virion

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
31280 + 1494 87 22 -20.7 5' arm      3' arm
31281 + 109648 88 20 -27 5' arm      3' arm
31282 + 128212 90 21.5 -22 5' arm      3' arm
31283 - 2324 86 26 -20.6 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.