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GenBank Identifier | RefSeq Acc. | Name |
70980518 | NC_007193.1 | Chaetoceros salsugineum nuclear inclusion virus |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
32631 | - | 5030 | 86 | 20 | -22.7 | 5' arm 3' arm | |||
32627 | + | 2671 | 90 | 21 | -23.3 | 5' arm 3' arm | |||
32630 | - | 3477 | 85 | 23 | -23.9 | 5' arm 3' arm | |||
32628 | + | 3143 | 89 | 20 | -26.3 | 5' arm 3' arm | |||
32629 | + | 3287 | 89 | 22 | -28.8 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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