miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
31606	+	1035	87	21.5	-23.8	YP_213961		5' arm      3' arm
31607	+	1401	87	22.5	-27.6	YP_213962		5' arm      3' arm
31620	-	2818	89	19.5	-24	YP_213963		5' arm      3' arm
31608	+	3324	86	20	-27.3	YP_213964		5' arm      3' arm
31621	-	3309	87	19	-21.7	YP_213964		5' arm      3' arm
31609	+	4228	89	20.5	-24.5	YP_213965		5' arm      3' arm
31610	+	4669	90	19.5	-21.8	YP_213965		5' arm      3' arm
31611	+	4831	90	23.5	-28.7	YP_213966		5' arm      3' arm
31613	+	7039	90	21	-21.7	YP_213966		5' arm      3' arm
31612	+	6751	90	21.5	-24.9	YP_213966		5' arm      3' arm
31622	-	7128	90	19.5	-20	YP_213966		5' arm      3' arm
31624	-	9520	87	19	-28.8	YP_213967		5' arm      3' arm
31623	-	8820	88	20.5	-26.4	YP_213967		5' arm      3' arm
31625	-	10812	86	22.5	-20.3	YP_213968		5' arm      3' arm
31626	-	11164	88	20	-24	YP_213968		5' arm      3' arm
31614	+	10818	87	20.5	-19.7	YP_213968		5' arm      3' arm
31615	+	12713	89	19.5	-24.9	YP_213969		5' arm      3' arm
31627	-	12628	88	20.5	-27.2	YP_213969		5' arm      3' arm
31628	-	14365	89	20	-22.3	YP_213970		5' arm      3' arm
31629	-	14540	90	23	-23.8	YP_213970		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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