miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
20198945 NC_003679.1 Border disease virus 1

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
14949 + 236 89 19.5 -26.4 5' arm      3' arm
14950 + 2795 82 20 -20.99 NP_620062 5' arm      3' arm
14951 + 4802 88 20.5 -22.4 NP_620062 5' arm      3' arm
14952 - 7954 90 20 -27.1 NP_620062 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.