miRNA display CGI


Results 1 - 20 of 149 are showing below:
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GenBank Identifier RefSeq Acc. Name
9635581 NC_002484.1 Pseudomonas phage D3

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
8876 - 129 90 21 -23.7 NP_061497 5' arm      3' arm
8799 + 6546 87 21.5 -22.7 NP_061505 5' arm      3' arm
8804 + 8267 84 20.5 -22.5 NP_061508 5' arm      3' arm
8805 + 9180 90 20.5 -19.4 NP_061510 5' arm      3' arm
8801 + 6793 90 20 -21.6 NP_061506 5' arm      3' arm
8802 + 7095 87 20 -19.8 5' arm      3' arm
8800 + 6666 88 19.5 -19.4 5' arm      3' arm
8812 + 12116 87 23.5 -21.2 NP_061515 5' arm      3' arm
8807 + 11235 90 21.5 -23 5' arm      3' arm
8803 + 7362 88 22 -27.4 NP_061507 5' arm      3' arm
8798 + 6004 87 23.5 -23 NP_061504 5' arm      3' arm
8797 + 3744 90 19 -22.8 NP_061501 5' arm      3' arm
8796 + 3599 89 22.5 -33.9 NP_061501 5' arm      3' arm
8789 + 799 90 22 -21.4 NP_061498 5' arm      3' arm
8792 + 2185 90 22 -19.4 NP_061499 5' arm      3' arm
8790 + 1128 89 21.5 -21.3 NP_061498 5' arm      3' arm
8793 + 2442 90 21.5 -20.3 NP_061500 5' arm      3' arm
8794 + 2557 86 21 -21.5 NP_061500 5' arm      3' arm
8788 + 427 78 20.5 -22.1 NP_061498 5' arm      3' arm
8791 + 1438 87 19 -21.9 NP_061498 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.