miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
8868	+	49467	90	20	-26.4	NP_061572		5' arm      3' arm
8891	-	10934	87	19	-26.4	NP_061513		5' arm      3' arm
8825	+	18924	89	19.5	-26.4			5' arm      3' arm
8853	+	37366	88	22	-26.4	NP_061549		5' arm      3' arm
8892	-	11167	89	20.5	-26.3	NP_061514		5' arm      3' arm
8848	+	34039	88	22	-26.3	NP_061542		5' arm      3' arm
8925	-	46881	88	21	-26.2	NP_061568		5' arm      3' arm
8857	+	40069	86	23.5	-26.1			5' arm      3' arm
8889	-	8273	85	19.5	-26	NP_061508		5' arm      3' arm
8845	+	32555	87	22	-26	NP_061540		5' arm      3' arm
8911	-	32398	87	19	-25.9	NP_061539		5' arm
8867	+	48196	82	19	-25.8	NP_061570		5' arm      3' arm
8866	+	47136	90	20.5	-25.3	NP_061569		5' arm      3' arm
8931	-	51838	86	22	-25.3	NP_061578		5' arm      3' arm
8863	+	43298	87	21.5	-25.2	NP_061562		5' arm      3' arm
8920	-	41295	89	21.5	-25	NP_061559		5' arm      3' arm
8898	-	16888	89	19	-24.7	NP_061522		5' arm
8851	+	36505	87	19.5	-24.7	NP_061549		5' arm      3' arm
8813	+	14417	90	23.5	-24.7	NP_061518		5' arm      3' arm
8832	+	26651	90	19	-24.6	NP_061530		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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