miRNA display CGI


Results 21 - 40 of 149 are showing below:
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GenBank Identifier RefSeq Acc. Name
9635581 NC_002484.1 Pseudomonas phage D3

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
8821 + 16910 82 19.5 -22.2 NP_061522 5' arm      3' arm
8825 + 18924 89 19.5 -26.4 5' arm      3' arm
8908 - 27321 86 19.5 -22.4 NP_061531 5' arm      3' arm
8873 + 54177 89 19.5 -22.4 5' arm      3' arm
8889 - 8273 85 19.5 -26 NP_061508 5' arm      3' arm
8894 - 13118 86 19.5 -20.5 NP_061516 5' arm      3' arm
8820 + 16801 87 19.5 -22.2 NP_061522 5' arm      3' arm
8851 + 36505 87 19.5 -24.7 NP_061549 5' arm      3' arm
8846 + 32815 89 19.5 -22.9 NP_061540 5' arm      3' arm
8936 - 55393 90 19.5 -21.9 NP_061587 5' arm      3' arm
8865 + 45931 86 19.5 -22.3 NP_061565 5' arm      3' arm
8830 + 25803 88 19.5 -23.2 NP_061527 5' arm      3' arm
8896 - 13446 86 19.5 -22.3 NP_061516 5' arm      3' arm
8800 + 6666 88 19.5 -19.4 5' arm      3' arm
8860 + 42159 85 19.5 -22.3 NP_061560 5' arm      3' arm
8809 + 11749 89 19.5 -19.5 NP_061515 5' arm      3' arm
8833 + 27623 87 19.5 -23.4 NP_061531 5' arm      3' arm
8868 + 49467 90 20 -26.4 NP_061572 5' arm      3' arm
8927 - 47868 85 20 -21 NP_061569 5' arm      3' arm
8922 - 43307 89 20 -24.2 NP_061562 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.