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| GenBank Identifier | RefSeq Acc. | Name |
| 9627246 | NC_001574.1 | Cacao swollen shoot virus |
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ID
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strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 3390 | - | 6838 | 89 | 21 | -23.6 | NP_041736 | 5' arm 3' arm | ||
| 3391 | - | 6973 | 83 | 22 | -20.9 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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