miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
71037362 NC_006383.2 Peste-des-petits-ruminants virus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
30327 - 9253 90 22 -20.1 5' arm      3' arm
30326 - 6774 89 21 -19.6 YP_133826 5' arm      3' arm
30325 - 5322 90 25 -26.5 5' arm      3' arm
30323 - 4760 90 25 -22.5 5' arm      3' arm
30324 - 5033 79 20.5 -32.5 5' arm      3' arm
30322 - 1379 82 19 -24.8 YP_133821 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.