miRNA display CGI


Results 1 - 9 of 9 are showing below:
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GenBank Identifier RefSeq Acc. Name
38018022 NC_005147.1 Human coronavirus OC43

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
22980 + 6043 87 25.5 -26.2 NP_937947 5' arm      3' arm
22983 + 20364 86 24 -25.8 NP_937947 5' arm      3' arm
22982 + 10702 90 23 -23.7 NP_937947 5' arm      3' arm
22984 + 21839 83 20 -23.1 NP_937948 5' arm      3' arm
22979 + 4076 89 25 -22.1 NP_937947 5' arm      3' arm
22985 + 28990 89 20.5 -22 NP_937953 5' arm      3' arm
22981 + 6438 88 26 -20.7 NP_937947 5' arm      3' arm
22987 - 22055 90 21.5 -20.7 NP_937948 5' arm      3' arm
22986 - 21925 89 19 -19.7 NP_937948 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.