miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
75750459 NC_007408.1 Alstroemeria virus x

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
32873 + 6407 88 23 -26.2 YP_319831 5' arm      3' arm
32874 - 1638 90 24 -23.8 YP_319827 5' arm      3' arm
32875 - 5821 87 19 -24.3 YP_319829 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.