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| GenBank Identifier | RefSeq Acc. | Name |
| 9627420 | NC_001600.1 | Cardamine chlorotic fleck virus |
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ID
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strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 3434 | + | 412 | 90 | 19.5 | -21 | NP_041884 | 5' arm 3' arm | ||
| 3435 | + | 696 | 90 | 24.5 | -30.5 | 5' arm 3' arm | |||
| 3436 | + | 2479 | 90 | 25.5 | -20.9 | NP_041886 | 5' arm 3' arm | ||
| 3437 | + | 2868 | 90 | 20 | -28.4 | NP_041887 | 5' arm 3' arm | ||
| 3438 | - | 201 | 87 | 19.5 | -26.6 | NP_041884 | 5' arm 3' arm | ||
| 3439 | - | 591 | 77 | 19 | -20.9 | NP_041884 | 5' arm 3' arm | ||
| 3440 | - | 2875 | 87 | 21.5 | -20.6 | NP_041887 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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