miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
19919919 NC_003499.1 Blueberry scorch virus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
13894 + 4151 89 22.5 -19.9 NP_612579 5' arm      3' arm
13895 + 7794 88 20 -19.5 NP_612812 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.