miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
20178623 NC_003670.1 Pepper ringspot virus RNA 2

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
14929 + 1149 88 19.5 -24.2 NP_620037 5' arm      3' arm
14930 - 1237 90 19 -19.5 NP_620037 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.