miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
14251125 NC_002796.1 Lactococcus phage BK5-T

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
11155 + 18237 90 19 -20.52 NP_116510 5' arm      3' arm
11156 - 31284 89 19.5 -24.12 NP_116533 5' arm      3' arm
11154 + 11345 87 24.5 -20.4 NP_116507 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.