miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
1341	+	7071	89	19	-21.3	NP_039677		5' arm      3' arm
1467	-	14260	88	19	-25.5	NP_039686		5' arm      3' arm
1370	+	24947	87	19.5	-24.2	NP_039697		5' arm      3' arm
1488	-	23268	90	19.5	-22.6	NP_039695		5' arm      3' arm
1508	-	39481	90	19.5	-24.1	NP_039724		5' arm      3' arm
1416	+	47629	89	19.5	-21.2	NP_039744		5' arm      3' arm
1360	+	18824	89	19.5	-21.1	NP_039691		5' arm      3' arm
1371	+	25082	89	19.5	-19.4	NP_039697		5' arm      3' arm
1524	-	51289	90	19.5	-27.4			5' arm      3' arm
1519	-	45808	90	19.5	-25.3	NP_039738		5' arm      3' arm
1390	+	34919	88	19.5	-23.3	NP_039714		5' arm      3' arm
1491	-	28119	85	19.5	-22.7	NP_039706		5' arm      3' arm
1350	+	12975	88	19.5	-23.1			5' arm      3' arm
1353	+	13849	89	19.5	-22.3	NP_039686		5' arm      3' arm
1459	-	12412	90	19.5	-29.4			5' arm      3' arm
1424	-	155	90	19.5	-26.7			5' arm      3' arm
1384	+	32346	89	19.5	-25.64			5' arm      3' arm
1398	+	39514	87	19.5	-20	NP_039725		5' arm      3' arm
1470	-	15299	90	19.5	-24.5	NP_039688		5' arm      3' arm
1356	+	16296	90	19.5	-25.7	NP_039690		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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