miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
1342	+	7845	90	22.5	-19.9	NP_039677		5' arm      3' arm
1343	+	8966	87	23	-20.2	NP_039678		5' arm      3' arm
1335	+	4157	90	19.5	-29.2			5' arm      3' arm
1334	+	4061	89	20	-22.9	NP_039673		5' arm      3' arm
1332	+	1772	88	20	-24.3	NP_039669		5' arm      3' arm
1345	+	10896	88	20	-25.2	NP_039680		5' arm      3' arm
1347	+	12082	88	20	-28.2	NP_039681		5' arm      3' arm
1361	+	19104	88	20.5	-19.7	NP_039691		5' arm      3' arm
1358	+	17452	88	19	-26	NP_039690		5' arm      3' arm
1356	+	16296	90	19.5	-25.7	NP_039690		5' arm      3' arm
1359	+	18381	90	20	-34.1	NP_039691		5' arm      3' arm
1354	+	16087	90	22	-20	NP_039690		5' arm      3' arm
1357	+	16805	90	23	-23.4	NP_039690		5' arm      3' arm
1355	+	16178	88	23	-28.3	NP_039690		5' arm      3' arm
1352	+	13382	89	19	-26.3	NP_039684		5' arm      3' arm
1344	+	10276	89	19	-30.3	NP_039679		5' arm      3' arm
1353	+	13849	89	19.5	-22.3	NP_039686		5' arm      3' arm
1350	+	12975	88	19.5	-23.1			5' arm      3' arm
1351	+	13064	90	20	-23.2			5' arm      3' arm
1349	+	12604	89	20	-29.1	NP_039683		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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