miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
20522096 NC_003795.1 Shallot virus X

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
15203 - 228 90 22 -22.1 NP_620648 5' arm      3' arm
15204 - 1979 85 21 -24.9 NP_620648 5' arm      3' arm
15205 - 2072 88 19.5 -20.1 5' arm      3' arm
15206 - 6814 86 19 -20.2 NP_620651 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.