miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
32244	+	5030	89	22.5	-22.7	YP_238736		5' arm      3' arm
32245	+	15720	82	25.5	-24.8	YP_238757		5' arm      3' arm
32246	+	26247	90	23.5	-24.3	YP_238771		5' arm      3' arm
32247	+	57928	88	19	-22.3	YP_238831		5' arm      3' arm
32248	+	77646	90	22	-21.8	YP_238864		5' arm      3' arm
32249	+	87437	84	22.5	-24.3	YP_238872		5' arm      3' arm
32250	+	102405	89	21.5	-20	YP_238885		5' arm      3' arm
32251	+	154983	90	21.5	-20.5	YP_238948		5' arm      3' arm
32252	+	167516	90	21	-23.1	YP_238966		5' arm      3' arm
32253	-	4003	83	22	-22.2	YP_238735		5' arm      3' arm
32254	-	13538	87	22	-23.3	YP_238751		5' arm      3' arm
32255	-	50347	80	21	-20.2			5' arm      3' arm
32256	-	62039	89	21	-22	YP_238837		5' arm      3' arm
32257	-	63845	81	19	-19.6			5' arm      3' arm
32258	-	67831	87	22	-20.8			5' arm      3' arm
32259	-	71619	84	20.5	-21.2	YP_238851		5' arm      3' arm
32260	-	74340	90	20.5	-20.7	YP_238858		5' arm      3' arm
32261	-	100141	89	20	-25.6	YP_238882		5' arm      3' arm
32262	-	109307	77	20	-24.6			5' arm      3' arm
32263	-	120893	87	21.5	-23.4	YP_238910		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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